uploader.models.UploadedFile

class uploader.models.UploadedFile(*args, **kwargs)

Model for ingesting bulk data uploads of both spectral and meta data files.

meta_data_file

The uploaded file containing rows of patient meta-data, e.g., observations, biosample collection info, etc.

Type:

django.models.FileField

spectral_data_file

The uploaded file containing rows of patient spectral data.

Type:

django.models.FileField

center

The center that all new uploaded patients will be associated to.

Type:

django.models.ForeignKey of user.models.Center

__init__(*args, **kwargs)

Methods

__init__(*args, **kwargs)
adelete(*args, **kwargs)
arefresh_from_db([using, fields, from_queryset])
asave(*args, **kwargs)
check(**kwargs)
clean()	Model validation.
clean_fields([exclude])	Clean all fields and raise a ValidationError containing a dict of all validation errors if any occur.
date_error_message(lookup_type, field_name, ...)
delete(*args[, delete_files])
from_db(db, field_names, values)
full_clean([exclude, validate_unique, ...])	Call clean_fields(), clean(), validate_unique(), and validate_constraints() on the model.
get_column_names([help_text])
get_constraints()
get_deferred_fields()	Return a set containing names of deferred fields for this instance.
get_next_by_created_at(*[, field, is_next])
get_next_by_updated_at(*[, field, is_next])
get_orphan_files()
get_previous_by_created_at(*[, field, is_next])
get_previous_by_updated_at(*[, field, is_next])
join_with_validation(meta_data, spec_data)	Validate primary keys are unique and associative.
prepare_database_save(field)
refresh_from_db([using, fields, from_queryset])	Reload field values from the database.
save(*args, **kwargs)	Save the current instance.
save_base([raw, force_insert, force_update, ...])	Handle the parts of saving which should be done only once per save, yet need to be done in raw saves, too.
serializable_value(field_name)	Return the value of the field name for this instance.
unique_error_message(model_class, unique_check)
validate_constraints([exclude])
validate_lengths(meta_data, spec_data)	Validate that files must be of equal length (same number of rows).
validate_unique([exclude])	Check unique constraints on the model and raise ValidationError if any failed.

Attributes

UPLOAD_DIR
center	Accessor to the related object on the forward side of a many-to-one or one-to-one (via ForwardOneToOneDescriptor subclass) relation.
center_id
created_at	A wrapper for a deferred-loading field.
id	A wrapper for a deferred-loading field.
meta_data_file	The descriptor for the file attribute on the model instance. Return a FieldFile when accessed so you can write code like::.
objects
pk
spectral_data_file	The descriptor for the file attribute on the model instance. Return a FieldFile when accessed so you can write code like::.
updated_at	A wrapper for a deferred-loading field.